Custom DNA & RNA Oligos - Tailormade Products
progress bar
progress bar

Frequently asked questions
Contact us
Subscribe to newsletter
w10.0.14 | c1.25.03.1
PROD | u7.5.14
  Quick Order  0
Ecom-Admin
  • Markets
  • Products
  • Company
  • Contact
  • EN
  • Oligonucleotide Synthesis
  • Gene Synthesis & Molecular Biology
  • Sanger Sequencing
  • Next Generation Sequencing
  • Genotyping & Gene Expression

Further Information:

>> EVOcard

>> Product FAQs

>> SALE %

Application Oligos

  • qPCR Probes
  • Ultimate Precision Probes
  • PCR Primer
  • SeqPrimer
  • Cloning Oligos
  • NGSgrade Oligos 2.0
  • NGSgrade Oligos
  • NGS UDI Primer Sets
>> Show more

Custom Oligos

  • Custom DNA Oligos
  • Salt-Free Oligos
  • Large Scale Oligos
  • Custom RNA Oligos
  • Special Requests
>> Show more

Oligo Tools

  • Oligo Analysis Tool
  • PCR Primer Design Tool
  • Sequencing Primer Design Tool
  • qPCR Assay Design Tool
  • siRNA Design Tool
  • Prepaid Oligo Coupons
  • Excel Order Forms
>> Show more

Benefit from more than 25 years of experience in oligonucleotide synthesis!

>> Show all products

Gene Synthesis

  • Standard Genes
  • Express Gene
  • Gene Synthesis Project
  • GENEius
>> Show more

GeneStrands

  • GeneStrands
  • Express GeneStrands

Molecular Biology Services

  • Plasmid Preparation
  • CRISPR/Cas9
>> Show more

Optimise your research and save time with high quality gene synthesis and molecular biology services.

>> Show all products

Sequencing Services

  • Mix2Seq Service
  • LightRun Services
  • TubeSeq Supreme
  • PlateSeq Supreme
  • Direct Colony Sequencing
  • Whole Plasmid Sequencing
  • Primer Walking Service
>> Show more

Prepaid Products

  • Mix2Seq Kits
  • LightRun Barcodes
  • Barcode Labels & Coupons
  • PlateSeq Kits
  • PlateSeq Kit Colony
  • ONT Prepaid Coupons
>> Show more

Additional Services

  • Free Barcode Labels
  • Sequencing Accessories
  • Sequencing Primers
  • Sample Shipment
>> Show more

Hiqh quality Sanger sequencing with highest flexibility for every sample type.

>> Show all products

Top 5 Products

  • INVIEW Resequencing
  • INVIEW Microbiome
  • INVIEW Transcriptome
  • INVIEW Metagenome
  • Amplicon sequencing
  • Bioinformatic services
  • Genome sequencing
>> Show more

Spotlight

  • INVIEW Exome
  • INVIEW Virus
  • INVIEW CRISPR Check
  • NGS Prepaid Coupons
  • Oncology Solutions
  • OLINK Explore 3072
  • Clinical Research Exome
  • Bacteria Hybrid Assembly
>> Show more

Oxford Nanopore Products

  • Whole Plasmid Sequencing
  • Linear / Clonal Amplicons
  • Bacterial Genome Sequencing
  • 16S Full-Length Microbiome
  • Complete ONT Portfolio
>> Show more

NGS from experts - ISO-certified, fully automated and easy to order online.

>> Show all products

Applied Genomic Services

  • DNA Barcoding
  • Cell Line Authentication
  • Mycoplasmacheck
  • Fragment Length Analysis
>> Show more

Genotyping services

  • SNP Genotyping
  • Copy Number Variation
  • Mikrosatellites/ STR/FLA/ IDAA
>> Show more

Gene Expression Services

  • Transcriptome analysis
  • Expression Arrays
  • Target Gene Expression
>> Show more

Cell line authentication, Mycoplasmacheck, Fragment length analysis & tailored projects.

>> Show all products
  • Pharma / Biotech
  • Agrigenomics
  • Consumer Genomics
  • Food & Environment
  • Diagnostic Kit Producer
  • Research / Biotech

Further Information:

>> Quality

>> Events

Synthesis Products

  • Industrial-grade NGS Oligos
  • Ultimate Precision Probes
  • Special Oligo Requests
  • Large Scale Oligos
  • Gene Synthesis
  • GeneStrands
  • Plasmid Preparation

Sequencing Services

  • Amplicon Sequencing
  • Exome Sequencing
  • Transcriptome Sequencing
  • Primer Walking Service

Favorite Content

  • NGS – Disease Diagnostics
  • Cancer Ecology
  • Personalised Cancer Therapy
  • Revolutionising human-like-protein production
  • The Microbiome Of Cancer
  • All about biomarker discovery

Our genomics solutions support you along your drug development chain of small and large molecules and in precision medicine.

>> Show all products

Plant Breeder

  • DNA marker discovery
  • Marker-assisted selection
  • GRAS-Di®
  • Microbiome and metagenomics

Animal Breeder

  • DNA Marker discovery
  • Pathogen screening
  • Parentage testing
  • Genomic selection
  • Marker-assisted selection

Favorite Content

  • Microarrays Accelerate Blue Biotechnology
  • How To Do NGS 50% Faster
  • NGS Portfolio

Benefit from our range of tailored, high throughput genotyping solutions to help you achieve your goals faster, for less.

>> Show all products

Sequencing Services

  • Genotyping
  • Epigenome Profiling
  • Microbiome Analysis
  • Shotgun Sequencing
  • Whole Genome Sequencing

Additional Services

  • Sample Collection Kits
  • Shipping
  • DNA Extraction
  • Laboratory Service
  • Biobanking

Favorite Content

  • Population Genetics
  • The End of Gene Doping
  • Home Genomics Testing
  • IVDR Compliance

Welcome to your full-service laboratory. Benefit from our end-to end solutions for sample collection kit logistics and genomic solutions.

>> Show all products

Food Testing

  • Food Authenticity
  • Meat Traceability
  • Pathogen Traceability
  • Cannabis and Hemp Testing

Environmental Testing

  • Non-targeted detection of organisms / species
  • Targeted detection of organisms / species
  • eDNA Tracker

Favorite Content

  • Determine the Source of Meat
  • Pine Nuts – Why Testing For Edibility Matters

DNA-based solutions to improve and support your analysis, monitoring and traceability across your value chain.

>> Show all products

Synthesis Products

  • Large Scale Oligos
  • Special Requests in Tubes
  • Special Requests in Plates

Quality Assurance

  • GLP
  • ISO 17025
  • ISO 13485

Favorite Content

  • Oligonucleotides For Diagnostics
  • The Future of RNA Applications

Our scalable and high-quality oligonucleotides synthesis offer makes us an ideal partner for your industry applications.

>> Show all products

Favorite Services

  • Custom DNA Oligos
  • TubeSeq Services Sanger
  • INVIEW Microbiome NGS
  • NGS Services
  • GeneStrands

Express Services

  • TubeSeq NightXpress
  • Mix2Seq NightXpress
  • Express Genes
  • Express GeneStrands

Favorite Content

  • Eurofins Genomics Goes Green
  • GENEius – Codon Usage Optimisation
  • 5 tips to speed up your qPCR

For your research project in academic, governmental and industrial environment we have the right genomic service.

>> Show all products

Corporate Information

  • About us
  • Career
  • Events
  • Press Releases
  • Collaborations
  • Blog
  • Newsletter
  • Quality Assurance
  • Lab closure times

Help

  • Video Tutorials
  • Ordering
  • Payment
  • Shipping & Delivery
  • Downloads
  • Data & Privacy
  • Material and Methods

Contact us

Eurofins Genomics
Germany GmbH
Anzinger Str. 7a
85560 Ebersberg
Germany

  • phone +49 7531 816068
  • e-mail support

Get in touch with us!

You need support or advice with your order? You don't find the perfect product or you like to get consultation regarding your results?

>> Get in touch

Find your product

Find your product

  • Sequencing Primer
  • PCR Primer
  • Mycoplasmacheck
  • SALE %
  • TubeSeq

Login to Eurofins

Please login with your email address and password!

>> Login

New at Eurofins Genomics?

Register a new account at Eurofins Genomics!

>> Register
Impersonating: Max Mustermann

Administration

  • Ecom Admin
  • Stop Impersonating

Welcome

Julian Schlossmacher

Login / Register

 
Email
Email can not be empty
Password:
Password can not be empty
Forgot password?
Create Account
No SSL
>> Logout >> My profile

Contact

Dr. Melvin Siliakus

+31 629 39 25 66 >> Send message

Account

  • Overview
  • Orders
  • Quotes
  • EVOcards
  • Preferences
  • DropBoxes
  • Sanger Kits & Barcodes
  • NGS Barcodes & Coupons
  • Sanger Samples & Primers
  • Oligo Coupons

Language

model-logo

New Website Navigation explained

>> Close
6

Last added items

0 Item(s)

Go to Cart

>> Go to cart X
 

Quick Order

X

Industrial-grade Products & Services

What are industrial-grade products? <<click here >>

Oligonucleotide Synthesis

  • Ultimate Precision Probes
  • NGSgrade Oligos in Tubes
  • NGSgrade Oligos in Plates
  • Request for Oligos in Tubes
  • Request for Oligos in Plates
  • Large Scale Oligos

Gene Synthesis & Molecular Biology

  • Gene Synthesis
  • GeneStrands
  • Express GeneStrands
  • Plasmid Preparation
  • Cloning Service

Next Generation Sequencing

  • Genome (Re-)Sequencing
  • Transcriptome Sequencing
  • Microbiome profiling
  • Exome Sequencing
  • Clinical Research Exome
  • Oncoprofiling
  • Liquid Biopsy Sample Sequencing
  • Ready-to-Load
  • Virus Sequencing
  • Amplicon Sequencing
  • Metagenome
  • ONT products
  • NGS Barcodes & UPS labels
  • Replacement samples
  • NGS Additional Services

Genotyping & Genexpression

  • Cell Line Authentication
  • Fragment Length Analysis
  • Mycoplasmacheck Barcodes
  • Cell Line Barcodes

Oligonucleotide Synthesis

Primers & Probes for qPCR Applications

  • PCR Primer in Tubes
  • PCR Primer NightXpress
  • PCR Primer in Plates
  • LocNA Primer
  • Dual Labeled Probes
  • MGB Probes
  • LocNA Probe
  • Molecular Beacons
  • LightCycler Probes
  • Probe based qPCR Assay
  • Ultimate Precision Probes

Oligos for Next Generation Sequencing

  • NGSgrade Oligos 2.0 Tubes
  • NGSgrade Oligos 2.0 Plate
  • NGSgrade Oligos in Tubes
  • NGS Oligos for NovaSeq
  • NGS Oligos for MiSeq
  • NGS UDI Primer Sets

Primers for Sanger Sequencing

  • SeqPrimer in Tubes
  • SeqPrimer NightXpress
  • SeqPrimer in Plates
  • Standard Primer

Oligos for Cloning Applications

  • Cloning Oligos
  • EXTREmer Oligos

Custom Oligos

  • Custom DNA Oligos in Tube
  • SaltFree Oligo NightXpress
  • Custom DNA Oligos in Plates
  • Custom RNA Oligos
  • O-Methyl-RNA / Chimerics
  • RNA qPCR Probes
  • siMAX siRNA
  • Special Oligos in Tubes

Oligo Tools

  • Oligo Analysis Tool
  • PCR Primer Design
  • SeqPrimer Design
  • qPCR Assay Design
  • siRNA Assay Design
  • Prepaid Oligo Coupons

Gene Synthesis & Molecular Biology

Synthetic genes

  • Gene Synthesis
  • Combinatorial libraries
  • Gene Synthesis Projects

GeneStrands

  • GeneStrands
  • Express GeneStrands

Molecular Biology Services

  • Plasmid Preparation
  • Site Directed Mutagenesis
  • DNA Cloning Service

Sanger Sequencing

Sanger Sequencing Services

  • TubeSeq Supreme
  • PlateSeq Supreme
  • Direct Colony Sequencing
  • Ready2Load Plate
  • Ready2Load Tube
  • Whole Plasmid Sequencing Tubes
  • Whole Plasmid Sequencing Plate
  • TubeSeq NightXpress
  • Primer Walking Service

Prepaid Products for Sanger Sequencing

  • Prepaid Barcodes & Coupons
  • Mix2Seq Kits
  • PlateSeq Kits
  • LightRun Barcodes
  • ONT Coupons

Additional Services

  • Tube & Plate Barcode Labels
  • Sequencing Accessories
  • Sample Shipment
  • Sequencing Primer Design

Next Generation Sequencing

Genome Sequencing

  • INVIEW Resequencing
  • NGSelect DNA
  • Whole Genome Sequencing
  • Bact. Whole Genome Seq (ONT)

Transcriptome Sequencing

  • INVIEW Transcriptome
  • NGSelect RNA

Metagenome / Microbiome

  • INVIEW Microbiome
  • INVIEW Metagenome

Exome Sequencing & Oncology Solutions

  • INVIEW Human Exome
  • Liquid Biopsy Samples
  • INVIEW Oncoprofiling
  • Clinical Research Exome

CRISPR & Prepaid NGS Coupons

  • INVIEW CRISPR Check
  • Redeem NGS Coupons
  • Order NGS Coupons

VIRUS

  • INVIEW Virus

Plasmid Sequencing

  • INVIEW Plasmid Verification
  • Whole Plasmid Sequencing (ONT) Tubes
  • Whole Plasmid Sequencing (ONT) Plate

Amplicon sequencing & Ready-to-Load

  • NGSelect Amplicon
  • NGSelect Ready-to-Load
  • Clonal Amplicons (ONT)

Oxford Nanopore projects (WGS, Amplicons, 16S)

  • ONT projects

ONT Lite

  • ONT Lite Whole Plasmid Sequencing
  • ONT Lite Clonal Amplicon Sequencing
  • ONT Lite Bacterial Genome Sequencing
  • ONT Lite Assembly Review

Additional Services

  • NGS Barcodes & UPS labels
  • NGS Additional Services
  • Sample Submission Guidelines
  • Prepaid NGS Coupons
  • Replacement samples
  • Request for Information

Genotyping & Gene Expression

Mycoplasmacheck

  • Mycoplasmacheck Barcodes
  • Mycoplasmacheck results

CLA & FLA

  • Cell line authentication Service (CLA)
  • Fragment length Analysis (FLA)
  • Cell line authentication barcodes

Others

  • Genotyping request form

EVOcard

Order / Refill EVOcard

Login / Register

 
Email
Email can not be empty
Password:
Password can not be empty
Forgot password?
Create Account
No SSL

 

  • Order Menu

    EVOcards

    • Order / Refill EVOcard

    Oligonucleotides & siRNA

    • (q)PCR Primer in Tubes
    • (q)PCR Primer in Plates
    • (q)PCR Primer NightXpress
    • SeqPrimer in Tubes
    • SeqPrimer in Plates
    • SeqPrimer NightXpress
    • Custom DNA Oligos in Tubes
    • Custom DNA Oligos in Plates
    • SaltFree Oligo NightXpress
    • NGSgrade Oligos in Tubes
    • Standard Primer
    • Standard Primer NightXpress
    • LocNA Primer
    • LocNA Probes
    • Dual Labeled Probes
    • MGB Probes
    • Probe based qPCR Assay
    • Cloning Oligos in Tubes
    • EXTREmer Oligos
    • Nano-Scale Plate Oligos
    • NGS UDI Primer Sets
    • Custom RNA Oligos
    • RNA qPCR Probes
    • siMAX siRNA
    • Large Scale Oligos
    • Special Oligo Requests
    • More...

    Custom DNA Sequencing

    • Mix2Seq Kits
    • LightRun Barcodes
    • Sequencing Primers
    • TubeSeq Service
    • SupremeRun Tube
    • Tube & Plate Barcode Labels
    • TubeSeq Labels & Coupons
    • SupremeRun Barcodes
    • Sequencing Accessories
    • PlateSeq Kits
    • SupremeRun 96
    • Primer Walking
    • PlateSeq Service
    • SupremeRun | Multiprimer
    • Sequencing Projects
    • Direct Colony Sequencing
    • Ready2Load Plate
    • More...

    Next Generation Sequencing

    • INVIEW Microbiome 3.0
    • NGSelect DNA
    • Barcode & UPS Labels
    • INVIEW Transcriptome
    • NGSelect RNA
    • Replacement samples
    • INVIEW Resequencing
    • NGSelect Amplicon
    • Sample Submission
    • INVIEW Human Exome
    • Redeem NGS Coupons
    • Request for Information
    • INVIEW CRISPR Check
    • SARS-CoV-2 RNA-Seq
    • More...
    • INVIEW Virus

    Gene Synthesis & Molecular Biology

    • New gene wizard
    • Plasmid Preparation
    • GeneStrands
    • Express Genes
    • DNA Cloning Service
    • Express GeneStrands
    • Gene Synthesis Project
    • Site Directed Mutagenesis
    • Combinatorial libraries
    • Synthetic genes
    • Corona Control Plasmids

    Genotyping & Gene Expression

    • Mycoplasmacheck
    • Cell Line Authentication 2.0
    • Fragment Length Analysis
    • Request for Information

0 Item(s)

Go to Cart

  • Other Languages
  • DNA & RNA
    Oligonucleotides
    • >

      Optimised Application Oligos

    • >
      Ultimate Precision Probes
    • >
      PCR Primers
    • >
      SeqPrimer
    • >
      Cloning Oligo
    • >
      EXTREmers
    • >
      NGSgrade Oligos
    • >

      qPCR Probes

    • >
      NGSgrade Oligos 2
    • >
      Custom DNA & RNA Oligos
    • >
      Custom DNA Oligos
    • >
      Large Scale Oligos
    • >
      Custom RNA Oligos
    • >
      siMAX siRNA
    • >
      Special Requests
    • >
      Salt Free Oligos
  • Custom DNA Sequencing
    • >

      Eurofins Services

    • >
      Mix2Seq
    • >
      Mix2Seq Kits
    • >
      TubeSeq Services
    • >
      TubeSeq Labels & Coupons
    • >
      PlateSeq Service
    • >
      PlateSeq Kits
    • >
      Direct Colony Sequencing
    • >
      Whole Plasmid Sequencing
    • >

      LightRun Services

    • >
      LightRun Barcodes
    • >
      GATC Services
    • >

      Additional Services

    • >
      Tube & Plate Barcode Labels
    • >
      Sequencing Primers
    • >
      Sequencing Accessories
    • >
      Sample Shipment
    • >
      Free Sample Pick-Up
    • >
      Shipping Options
  • Next Generation Sequencing
    • >

      NGS Built For You

    • >
      INVIEW Microbiome
    • >
      INVIEW Transcriptome
    • >
      INVIEW Exome
    • >
      INVIEW Metagenome
    • >
      INVIEW CRISPR Check
    • >
      INVIEW Virus
    • >
      NGS prepaid solutions
    • >
      INVIEW Plasmid Verification
    • >

      NGS Build Your Own

    • >
      NGSelect DNA
    • >
      NGSelect RNA
    • >
      NGSelect Amplicons
    • >
      NGSelect Ready2Load
    • >
      Human Whole Genome Sequencing
    • >
      WGS Select
    • >
      Bacteria Whole Genome Sequencing
    • >
      Amplicon sequencing
    • >
      Amplicon sequencing - full service
    • >

      Applications

  • Gene Synthesis / Molecular Biology
    • >

      Gene Synthesis

    • >
      Standard Genes
    • >
      Express Genes
    • >
      Complex Genes
    • >
      GeneStrands
    • >
      Express GeneStrands
    • >
      Combinatorial Libaries
    • >
      GENEius
      • >

        Molecular Biology Services

      • >
        Plasmid Preparation
      • >
        Site Directed Mutagenesis
      • >

        Applications

      • >
        CRISPR_Cas9
    • Genotyping & Gene Expression
      • >

        Service Platforms

      • >
        Illumina Array Platforms
      • >
        Affymetrix Array Platforms
      • >
        Fluidigm BioMark & EP1
      • >
        Roche LightCycler
      • >
        Sanger & NGS Sequencing
      • >

        Genotyping Services

      • >
        SNP Genotyping
      • >
        Microsatellites / STR / FLA / IDAA
      • >
        Sequencing Based Genotyping
      • >
        Genotyping by PCR
      • >
        Genome Wide Association
      • >
        Human Identification
      • >
        Copy Number Variation
      • >

        Gene Expression Services

      • >
        Transcriptome Analysis
      • >
        Expression Arrays
      • >
        Target Gene Expression
      • >
        miRNA / Small RNAs Analysis
      • >

        Applied Genomics Services

      • >
        Residual DNA Analysis
      • >
        DNA Barcoding
      • >
        Cell Line Authentication
      • >
        Mycoplasmacheck

    Custom DNA Oligos

    • You are here:
    • DNA & RNA|Oligonucleotides >
    • Custom DNA & RNA Oligos >
    • Custom DNA Oligos

     

     

    Custom DNA Oligos - For all kind of applications


    Select from the huge variety of modifications, purification options and synthesis scales.

     

     

    DNA Oligos in Tubes

    DNA Oligos in plates

    Large scale oligos

    Special requests

     

    Custom DNA Oligos in Tubes

     

    • Huge variety of DNA modifications available
    • Synthesis scales from 0.01 µmol to 10 µmol
    • Purification options: Salt Free, HPSF, HPLC
    • Sequence lengths:
      • 10 - 120 bases for unmodified oligos
      • 10 - 80 bases for modified oligos (5-50 bases for some 3' modifications)
    • Quality control by OD measurement and MALDI-TOF MS
    • Delivery in 2ml screw cap tubes
    • Delivery format: lyophilised or concentration adjusted
    • Aliquoting service available

     

    Custom DNA Oligos in Plates

     

    • Large variety of DNA modifications available
    • Synthesis scales: 0.01 µmol, 0.05 µmol and 0.2 µmol
    • Purification options: Salt Free, HPSF, HPLC
    • Sequence lengths:
      • 10 - 120 bases for unmodified oligos
      • 10 - 80 bases for modified oligos (5-50 bases for some 3' modifications)
    • Quality control by OD measurement and MALDI-TOF MS
    • Delivery format: Liquid at selected concentration
    • Mixing of forward and reverse primers possible
    • Generation of plate copies (aliquot - plates) available

     

     

     

    >> FAQ's Oligonucleotides

    >> Oligo Analysis Tool

    >> Application oligos

    >> qPCR Probes Portfolio

     

     

    Related Information

     

     

    Salt Free Oligos

    Synthesis and postprocessing in ultra high throughput.

    • Available for all unmodified DNA oligos
    • Deprotected and free from salt
    • Accurate quantification - Variability of max. +/- 20% 
    • Fast TAT of 1-3 working days up to 60mer, 0.01 - 1.0 µmol scale
    • TAT of > 61 mer or 10.0 µmol scale 4-10 working days


    Make use of a NightXpress delivery by placing your SaltFree Oligo order before 9:00 am CET


    Minimum and average yields (OD) per scale and length:

    Length [bases] /
    Synthesis scale
    10 - 17
    18 - 35
    36 - 50
    51 - 80
    81 - 120
    0.01 µmol
    minimum  3.0 4.0 7.0 xxx xxx
    average 6.0 8.5 14.5 xxx xxx
    0.05 µmol minimum   4.0 6.0  10.0  10.0  10.0 
    average  8.0 12.5  20.0  25.0  30.0 
    0.20 µmol minimum  10.0 12.0 20.0 25.0 25.0
    average 20.0 25.0  40.0  35.0  na 
      1.0 µmol minimum  30.0 35.0  50.0  60.0  60.0 
    average na na na  na  na 
       10 µmol minimum   300 500 400  400  200 
    average na na na na na

    Typical yield and purity applies to a 20mer; Calculation: 1 OD = 5 nmol = 30 μg; may vary for individual dyes, sequences with GC content > 70%, > 3 purine stretches, or strong secondary structures.

    The synthesis scale indicates the initial amount of 3' bases; There is no OD guarantee for oligos < 18 and > 35 bases.

     

    HPSF Purified Oligos

    HPSF is a size exclusion method by gel filtration and stands for High Purity Salt Free. 

    • Available for all unmodified and some modified oligos
    • Cleaned from chemicals and truncated sequences
    • Free from any disturbing salts
    • Accurate quantification - Variability of max. +/- 10% 
    • Purity of >70 % for 18-35mer oligos
    • Fast TAT of 1-4 working days up to 60mer, 0.01 - 1.0 µmol scale
    • TAT of > 61 mer or 10.0 µmol scale 6-10 working days


    Minimum and average yields (OD) per scale and length for unmodified oligos:

    Length [bases] /
    Synthesis scale
    10 - 17
    18 - 35
    36 - 50
    51 - 80
    81 - 120
    0.01 µmol
    minimum  1.5 2.0 2.5 xxx xxx
    average 3.0 5.0 9.0 xxx xxx
    0.05 µmol minimum  2.0 3.0  5.0  3.0  3.0 
    average  4.0 7.5  15.0  15.0  15.0 
    0.20 µmol minimum  4.0 6.0 10.0 10.0 10.0
    average na 15.0  25.0  25.0  22.0 
      1.0 µmol minimum  15.0 25.0  30.0  30.0  30.0 
    average na 40.0 50.0  45.0  na 
       10 µmol minimum   150 300 200  200  150 
    average na na na na na


    Minimum yields (OD) per scale for modified oligos:

    Synthesis scale
    0.01 µmol
    0.05 µmol
    0.2 µmol
    1.0 µmol
    10 µmol
    HPSF
    minimum OD 2.0 3.0 5.0 10.0 100

     

    Typical yield and purity applies to a 20mer; Calculation: 1 OD = 5 nmol = 30 μg; may vary for individual dyes, sequences with GC content > 70%, > 3 purine stretches, or strong secondary structures.

    The synthesis scale indicates the initial amount of 3' bases. Length restriction for some 3' modified oligos is 5 - 50 bases; please inquire.

    There is no OD guarantee for oligos < 18 and > 35 bases or for oligos with more than one modification.

     

    HPLC Purified Oligos

    HPLC means High Performance Liquid Chromatography. The purification method with high separation efficiency.

    • Available for all type of DNA oligos
    • Removal of truncated sequences
    • Accurate quantification - Variability of max. +/- 10% 
    • Purity of ≥80 % for up to 120 mers
    • TAT: 5-7 working days up to 60mer, 0.01 - 1.0 µmol scale
    • TAT of > 61 mer or 10.0 µmol scale 10 working days


    Minimum and average yields (OD) per scale and length for unmodified oligos:

    Length [bases] /
    Synthesis scale
    10 - 17
    18 - 35
    36 - 50
    51 - 80
    81 - 120
    0.01 µmol
    minimum  1.0 1.5 2.0 xxx xxx
    average 2.5 4.0 6.0 xxx xxx
    0.05 µmol minimum  2.0 2.5  3.0  3.0  3.0 
    average 3.5 6.0  10.0  9.5  9.3 
    0.20 µmol minimum  4.0 6.0 6.0 6.0 4.0
    average 6.5 13.5  17.5  14.0  10.0 
      1.0 µmol minimum  10.0 10.0  20.0  15.0  10.0 
    average 18.5 35.0 40.0  25.0  na 
       10 µmol minimum   80 150 180  120 80
    average na na na na na


    Minimum yields (OD) per scale for modified oligos:

    Synthesis scale
    0.01 µmol
    0.05 µmol
    0.2 µmol
    1.0 µmol
    10 µmol
    HPLC
    minimum OD 1.0 2.0 3.0 6.0 60

     

    Typical yield and purity applies to a 20mer; Calculation: 1 OD = 5 nmol = 30 μg; may vary for individual dyes, sequences with GC content > 70%, > 3 purine stretches, or strong secondary structures.

    The synthesis scale indicates the initial amount of 3' bases.

    Length restriction for some 3' modified oligos is 5 - 50 bases; please inquire. For some internal modifications where an additional Amino-C6-dT linker is used, additional fees are charged (please inquire).

    There is no OD guarantee for oligos < 18 and > 35 bases or for oligos with more than one modification.

     

    Fluorescent Dyes

    Available fluorescent dyes and their characters at a glance


    Product specifications:

    • Synthesis scales from 0.01 to 1.0 µmol
    • Purification options: HPSF, HPLC
    • Sequence lengths: 10 - 80 bases
    • Turnaround time: 3 - 5 working days

     

    Spectra of fluorescent dyes

     

    Dye Abs Em Ext. coeff. Mol. weight 5' Int 3'
    ATTO 425 [ATTO425] 439 485  45,000  498.00  x x x
    FAM [FAM] 495 520  83,000  474.50  x - -
    Fluorescein isothiocyanate [FITC] 495 520  73,000 505.00 x x x
    Fluorescein [FLU] 495 520  83,000  504.00  - - x
    Fluorescein-dT [FLUdT] 494 522  75,000 472.71 - x -
    ATTO 488 [ATTO488] 500 520  90,000 981.00 x x x
    TET [TET] 521 536  73,000 612.30 x - -
    JOE [JOE] 520 548  73,000  603.40  x - -
    Yakima Yellow [YAKYE] 530 549  84,000  654.30  x - -
    HEX [HEX] 535 556  73,000 681.20 x - -
    Cyanine3 [CY3] 550 568 150,000 553.70 x - -
    Cyanine3B [CY3B] 559 570 130,000 658.00 x x x
    ATTO 550 [ATTO550] 554 576 120,000  791.00  x x x
    TAMRA [TAM] 544 576  90,000  512.50 / 612.70 x x -
    ATTO 565 [ATTO565] 564 590  120,000  708.00  x x x
    ROX [ROX] 575 602  82,000  632.78  x x x
    Texas Red [TxRed] 583 603 116,000  818.00  x x x
    LightCycler 610 [LC610] 590 610  n.a. 761.48 x x x
    ATTO 594 [ATTO594] 603 626 120,000 1389.00 x x x
    LightCycler 640 [LC640] 625 640  n.a. 824.68 x x x
    ATTO 647N [ATTO647N] 646 664 150,000  843.00  x x x
    Cyanine5 [CY5] 647 673 250,000  578.70  x - -
    ATTO 655 [ATTO655] 663 680 125,000 625 x x x
    Cyanine5.5 [CY55] 688 711 250,000  570.74  x - -
    DY-682 [DY682] 690 709 140,000  906.00  x x x
    ATTO 700 [ATTO700] 700 716 120,000  837.00  x x x
    DY-782 [DY782] 782 800 170,000  932.00  x x x

    Although the data presented in this table have been checked for accuracy, the emission, absorption and extinction coefficient values may vary slightly with each oligonucleotide.

    Non Fluorescent Modifications

    Available non-fluorescent modifications and their structures


    Product specifications:

    • Synthesis scales from 0.01 to 1.0 µmol
    • Purification options: HPSF, HPLC
    • Sequence lengths: 10-80 bases; 10-50 bases for some 3' modifications
    • TAT: 2-4 working days

     

    Amino-C6 [AmC6] Amino-C12 [AmC12]

    5' Amino groups are often used for coupling the oligonucleotides to solid supports. Amino groups can also be used to attach secondary modifications such as fluorescent dyes or large molecules like digoxigenin.

    Structure of 5' Amino C6    Structure of 5' Amino C12

     

    Amino-C3 [AmC3] Amino-C6 [AmC6] Amino-C7 [AmC7]

    3' Amino C7 and C3 can be used to block polymerase and exonuclease activity.

    3' Amino C3 structure   3' Amino C6 structure   3' Amino C7 structure

     

    Biotin [BIO]

    Biotinylated oligonucleotides are known for their ability to bind to streptavidin. Biotin added at the 3' end can be used to block exonuclease digestion.

    5' Biotin structure

     

    Biotin-TEG [BIOTEG]

    Biotin-TEG allows for an increase in binding to the streptavidin deep-binding pocket due to the fact that it has the longest linker arm from the Biotin group (e.g. used for hybridisation studies).

    Biotin-TEG structure

     

    Cholesterol [CHOL]

    Cholesterol is a hydrophobic molecule. Coupled at the 3’ end of an oligonucleotide cholesterol has been established as a reliable courier through membranes and facilitates uptake into cells.

    3' Cholesterol structure


    Digoxigenin [DIG]

    Digoxigenin is used primarily as a non isotopic label for oligonucleotides. Common applications include diagnostics, sequencing, and in-situ hybridisations.

    Digoxigenin structure

     

    Phosphate [PHO]

    Phosphorylation allows the oligonucleotides to be used as a substrate for DNA ligase. 3' modifications can be used to block further extension by DNA. Terminal phosphates are also useful for enabling the ligation of two individual oligonucleotides together.

    Phosphate structure


    Thiol Modifier C3 [ThiolC3] Thiol Modifier C6 [ThiolC6]

    It is used for the coupling of oligonucleotides to solid supports. Thiol can also be used for the attachment of fluorescent and non-fluorescent modifications.

    3' Thiol C3 structure       5' Thiol C6 structure

     

    Spacer, Linker, Base & Sugar Modifications

    Spacer, linkers, base & sugar modifications and their structures


    Product specifications:

    • Synthesis scales from 0.01 to 1.0 µmol
    • Purification options: HPSF, HPLC
    • Sequence lengths: 10-80 bases
    • TAT: 2-4 working days

     

    2'-Deoxyinosine [I]

    2'-Deoxyinosine (INO) is a universal base that is less destabilising than mismatches found within a wobble or degenerated base.

    2'-Deoxyinosine structure

     

    2'-Deoxyuridine [U]

    2'-Deoxyuridine (URI) are often used as a substitute for dT.

    2'-Deoxyuridine structure

     

    5-Methyl-dC [5MedC]

    5-Methyl-dC stabilises the DNA duplex due to an increase in the melting temperature during the replacement of the dC.

    5-Methyl-dC structure

     

    Amino-C6-dT [AmC6dT]

    Amino C6-dT allows internal modifications within the oligonucleotides sequence.

    Amino C6-dT structure

     

    Biotin-dT [BIOdT]

    Biotin-dT can be used for an internal biotin modification (e.g. for hybridisation studies).

    Biotin-dT structure

     

    2',3'-dideoxyC [23ddC]

    3'-ddC prevents extension by DNA polymerases and prevents degradation by 3'-exonucleases.

    3'-ddC structure

     

    dSpacer [Spd]

    The dSpacer is used to create a stable abasic site within an oligonucleotide.

    dSpacer structure

     

    Spacer C3 [SpC3]

    Spacer C3 can be coupled to the 3'-end and internally of an oligonucleotide sequence. This can prevent e.g. the elongation of the oligo during a PCR without a major influence to its annealing properties. Oligos with C3 spacers are therefore ideal hybridisation probes in PCR reactions.

    C3 spacers structures

     

    Wobbles [WOB] (defined ratio) 

    The following IUB code is used to describe degenerated bases (wobbles). Wobbles are available with a defined and non defined ratios.

    M
    R
    W
    S
    Y
    K
    V
    H
    D
    B
    N
    AC
    AG
    AT
    GC
    CT
    GT
    AGC
    ACT
    AGT
    GCT
    AGCT

     

     

    Dark Quencher

    Dark quencher extends quenching efficiency in real-time PCR

     

    BHQ1 [BHQ1] 480-580 nm

    BHQ1 is one of the Black Hole Quencher from Biosearch Technologies, Inc. BHQ1 is an highly efficient dark quencher for Dual Labeled Probes, Molecular Beacons and FRET probes with an excellent spectral overlap for all dyes in the green to dark yellow emission spectrum.

    Quenching Range: 480-580 nm
    Max. Absorbance: 534 nm
    Molar Extinction Coefficient: 34.000  M−1 cm−1
    Molecular Weight: 491.5 g/mol

     

    BHQ1-dT [BHQ1dT] 480-580 nm

    BHQ1-dT is one of the Black Hole Quencher from Biosearch Technologies, Inc. BHQ1-dT is an highly efficient quencher used for internal labelling for all dyes in the green to dark yellow emission spectrum. It can be used in addition to other 3' quenchers.

    Quenching Range: 480-580 nm
    Max. Absorbance: 534 nm
    Molar Extinction Coefficient: 34.000 M−1 cm−1
    Molecular Weight: 491.5 g/mol

     

     

    BHQ2 [BHQ2] 520-650 nm

    BHQ2 is the second Black Hole Quencher from Biosearch Technologies, Inc. in our portfolio. BHQ2 is a highly efficient dark quencher for Dual Labeled Probes, Molecular Beacons and FRET probes containing 5’ fluorophores in the dark green to orange emission sector.

    Quenching Range: 520-650 nm
    Max. Absorbance: 544 nm
    Molar Extinction Coefficient: 91.000 M−1 cm−1
    Molecular Weight: 493.5 g/mol

     

    BHQ2-dT [BHQ2dT] 560-670 nm

    BHQ2-dT is one of the Black Hole Quencher from Biosearch Technologies, Inc. BHQ2-dT is an highly efficient quencher used for internal labelling for all dyes in red emission spectrum. It can be used in addition to other 3' quenchers.

    Quenching Range: 560-670 nm
    Max. Absorbance: 592 nm
    Molar Extinction Coefficient: 44.000 M−1 cm−1
    Molecular Weight: 898 g/mol

     

    BBQ 650 [BBQ650] 550-750 nm

    The BlackBerry Quencher 650 is an excellent long wavelength quencher for Dual Labeled Probes, Molecular Beacons and FRET probes containing long wavelength dyes such as Cy5, Cy5.5 and other dyes in the red to near-infrared emission spectrum.

    Quenching Range: 550-750 nm
    Max. Absorbance: 650 nm
    Molar Extinction Coefficient: 41.000 M−1 cm−1
    Molecular Weight: 575.6 g/mol

     

     

    Backbone Modification / PTO

    PTOs, the defense line against nucleases

     

    Phosphorothioate (PTOs) are the most widely used nuclease resistant oligos for antisense applications.

    In PTO oligos, a non-bridging oxygen is replaced by a sulfur atom. Therefore, PTOs are also known as "S-oligos". Phosphorothioate bounds can be introduced to an oligo

    • at the 5'- or 3'-end
      Inhibits exonuclease degradation
    • Internally 
      Limit the attack by endonucleases

     

    Product specifications:

    • Synthesis scales from 0.01 to 10 µmol
    • Purification options: HPSF, HPLC
    • Oligo lengths: 10-120 bases
    • TAT: 2-4 working days
    Purification option Synthesis scale1 [µmol] 0.01 0.05 0.20 1.00
    HPSF Minimum yield [OD]2 2 4 6 20
    HPLC Minimum yield [OD]2 1 3 5 15

    1 The synthesis scale indicates the initial amount of 3'-bases
    2 There is no OD guarantee for oligos <18 and >35 bases or for oligos with multiple modifications

     

    Good to know!

    PTO oligos can show greater non-specific protein binding than unmodified phosphodiester (PO) oligos. They can lead to toxic effects or cause artefacts building when present in high concentrations.

    These problems can be reduced or eliminated by using chimeric designs, which limit the number of phosphorothioate internucleoside linkages within the oligo. 

     

    Documentation

    All relevant documents are provided in your online account:

    • Oligo synthesis report
    • Plate report
    • Delivery note
    • Quality report incl. QC spectra, if requested

     

     

    Ordering Oligos in Plates


    To ensure a smooth ordering process, here are some hints how to order custom DNA oligos in plate format.


    Ordering online:

    • Up to 12 plates can be specified via file-upload or copy & paste
    • One plate must contain a minimum of 12 oligos
    • Modifications can be entered directly in the sequence
    • Concentration and volume can be specified
    • Plate copies as additional service can be selected
    • A plate overview enables you to validate and edit single wells


    Available plate types:

    • 96well, 1.2 ml, round wells
    • 96well, 0.8 ml, round wells
    • 96well, 2.2 ml, deep well plates
    • 96well, 0.2 ml PCR plates


    Good to know:

    Plate oligos are delivered in the selected plate type with the required volume (max. 500µl resp. 150µl for PCR Plates) for the selected concentration. 

    For additional plate copies (aliquot-plates) or mixture plates the requested volume is taken from the mother plate.

    The remaining oligos in the mother plate are always provided along with the plate copies or the mixture plates without additional charge.


    Important for mixture plates:

    • Define the plates for the forward and reverse primers (e.g. Plate1_ for, Plate1_ rev)
    • Use the same primer names accompanied by the suffix “.for” or “.f” and “.rev” or ”.r”
    • Select the concentration of the forward and reverse primers
    • Specify the final concentration and volume of the primer mix in the order comment

     

    Custom projects:

    If you need additional plate formats, a special normalisation or pooling service, please send us your request!

     

     

    Literature

     

    Oligo safety data sheet (MSDS)

    Spectra of fluorescent dyes

    Oligonucleotide brochure

    RAPD 10mer oligo sequences

     

     

     

     

     

     

     

    Solutions you may also like

     

     

     

    EVOCard


    The prepaid card for more
    flexibility in your research


    >> READ MORE

     

     

     

    NGSgrade Oligos


    Improve your next generation sequencing data


    >> READ MORE

     

     

     

    SeqPrimer


    The perfect primer for
    Sanger sequencing


    >> READ MORE

     

     

     

    PCR Primer


    The optimum primer for every
    PCR and real-time PCR assay


    >> READ MORE

     

     

    Quality is important for us at Eurofins

    Our products and services are produced and performed under strict quality management and quality assurance systems.

    Find certificates here

    Quality is important for us

    Our products and services are produced and performed under strict quality management and quality assurance systems.

    Find certificates here
    Production Site
    • Europe
    • America
    • India
    • Japan
    Eurofins Genomics
    • Terms & Conditions
    • Sitemap
    • Imprint
    • Privacy
    • Licenses
    • Cookie Settings
    Contact
    General Customer Support
    phone +49 7531 816068
    Toll free phone number for
    Europe: 00800 200 100 20
    support-eu@genomics.eurofinseu.com

    Eurofins Genomics Europe Shared Services GmbH
    Anzinger Str. 7a
    85560 Ebersberg
    Germany

    /p>

    2025 - Eurofins Genomics

    VEGA Beta