Custom RNA Oligos                                            

Custom RNA Oligos

 

 

Single Strand RNA, O-Methyl-RNA / Chimerics & RNA qPCR Probes


RNA oligonucleotides ready for use in any application.

 

 
 

Introduction of our Custom RNA Portfolio:


Are you working on CRISPR applications, qPCR, RNA structure studies, or synthetic biology research?


With decades of expertise in oligonucleotide synthesis, Eurofins Genomics offers a comprehensive portfolio of high-quality RNA oligos and a broad selection of modifications:

  • Custom single strand RNA oligos 
    Custom single-stranded RNA oligos, 5 to 80 nucleotides long, are available desalted or HPLC-purified with various modifications to ensure reliable performance for your research.
  • O-Methyl-RNA Oligos & Chimerics
    In chimeric antisense oligos, the incorporation of 2'-O-Methyl-RNA enhances resistance to nuclease degradation. These oligos combine DNA and RNA bases, often including modifications such as 2'-O-Methyl groups or PTOs.
  • RNA qPCR Probes
    RNA qPCR probes are specifically optimized for real-time quantitative PCR, manufactured using advanced synthesis and purification techniques to ensure minimal background noise.

 

 

Discover the Benefits of our Custom RNA Oligo Portfolio:

  • Effortless online ordering through intuitive product pages
  • Flexible synthesis scales to perfectly match your project needs
  • Choose from desalted or HPLC-purified unmodified RNA oligos
  • All modified RNA oligos, qPCR probes, and 2’-O-Methyl-RNA / chimeric oligos come HPLC purified by default
  • Rigorous quality control with OD measurement and MALDI-TOF MS ensures outstanding reliability

Comprehensive documentation delivered with every order:

  • Detailed oligo synthesis report
  • Clear and precise delivery note

Exclusive free online tools to streamline your workflow:

  • Selectable label layouts for your oligo tubes
  • Complementary sequence calculator with direct ordering
  • Online status and delivery tracking to keep you informed every step of the way
 

 
 

 

Specifications

 

 

Unmodified RNA Oligos

What you can expect from our unmodified Custom RNA Oligos


Rely on first class RNA synthesis up to 80 bases

  • Minimum yields in OD
  • Sequence lengths:
    • HPLC purified RNA: 5 - 80 bases
    • Desalted RNA: 5 - 40 bases
  • Quality control by OD measurement and MALDI-TOF
  • Turnaround time: 8 - 10 working days
  • Delivery: lyophilised in 2ml screw cap tubes

Purification option Purity Synthesis scale [µmol] 0.05 0.20 1.00
Desalted n.a. Minimum yield [OD] 1.5 2 5
HPLC > 85% Minimum yield [OD] 0.5 2 2.5

 

Modified RNA Oligos

What you can expect from our modified RNA oligos


Product specifications:

  • Synthesis scales from 0.05 to 1.0 µmol
  • HPLC purified
  • Minimum yields in OD
  • Quality control by OD measurement and MALDI-TOF
  • Sequence lengths from 5 - 80 bases
  • Turnaround time: 8 - 10 working days
  • Delivery lyophilised in tube format

 

Purification option Purity Synthesis scale [µmol] 0.05
0.20
1.00
HPLC >80% Minimum Yield [OD] 0.5 2 2.5

 


Available modifications for our single strand custom RNA oligos:

 

Fluorescent dyes 5' Int 3'
FAM [FAM] x  -  -
TET [TET] x - -
HEX [HEX] x - -
Cyanine3 [CY3] x - -
Cyanine5 [CY5] x - -
Non fluorescent modifications 5' Int 3'
Amino-C6 [AmC6] x - -
Biotin [BIO] x - -
Biotin-TEG [BIOTEG] x - x
Phosphate [PHO] x - x
Spacer, linker, base & sugar modifications 5' Int 3'
2'-Deoxyinosine [I] x x x
2'-Deoxyuridine [U] x x x
5-Methyl-dC [5MedC] x x x

 

O-Methyl-RNA / Chimerics

Chimeric oligos and 2'O-Methyl-RNA oligos


The use of 2'O-Methyl-RNA in chimeric antisense oligos increases nuclease stability of the oligo.


Chimeric oligonucleotides consist of mixed DNA and RNA bases including methylated bases or phosphorthioate bounds (PTO).

 

Product specifications:

  • HPLC purified
  • Synthesis scales from 0.05 µmol up to 1.0 µmol
  • Minimum yields in OD
  • Sequence lengths from 6 to 80 bases
  • Quality control by OD measurement and MALDI-TOF MS
  • TAT: 6 - 8 working days
  • Delivery: lyophilised in 2ml screw cap tubes

 

Synthesis scale [µmol]
0.05
0.20
1.00
Min. Yield [OD] 0.5 2 2.5
Length restriction [bases] 6 - 80 6 - 80 6 - 80

 

HPLC is required for purification of chimeric oligos. We recommend to perform a Na+ salt exchange with commercially available desalting columns (e.g. NAP or MicroSpin columns) before use in cells or live animals. 

 

 

 

RNA qPCR Probes

What you can expect from our custom RNA qPCR Probes

RNA qPCR Probes are produced according to technologically advanced synthesis and purification protocols.

The range of reporter-quencher combinations suit probe-based hybridisation assays.

 

Product specifications:

  • HPLC purification inclusive
  • Synthesis scales from 0.05 to 1.0 µmol
  • Sequence lengths 15 - 40 bases
  • QC by MALDI-TOF MS


Available dye-quencher combinations:

5' Dye

FAM, HEX, TET, CY3, CY5, TAM, Others on request

3' Quencher

BHQ1, BHQ2, BBQ650, Dabcyl, Ecplise



 

 

 

Literature

 

 

 

 

 

 

Quality is important for us at Eurofins

Our products and services are produced and performed under strict quality management and quality assurance systems.

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