Selected publications about genome sequencing
2016
Genome Sequencing: Sollars, E. et al., Genome sequence and genetic diversity of European ash trees. Nature (2016); doi:10.1038/nature20786
2015
Genome Sequencing: Sakai, H. et al., The power of single molecule real-time sequencing technology in the de novo assembly of a eukaryotic genome. Scientific Reports, 5:16780
Genome Sequencing: Sato, K. et al., Resequencing of the common marmoset genome improves genome assemblies and gene-coding sequence analysis. Scientific Reports, 5:16894
Genome Sequencing: Tourasse, N. et al., The complete mitochondrial genome sequence of the green microalga Lobosphaera (Parietochloris) incisa reveals a new type of palindromic repetitive repeat. BMC Genomics, vol. 16:580
Genome Sequencing: Shimomura, M. et al., The Glycine max cv. enrei genome for improvement of Japanese soybean cultivars. Intern. Journal of Genomics, vol. 2015 (358127)
2014
Genome Sequencing: Wang, J. et al., Nucleotide sequences of 16 transmissible plasmids identified in nine multidrug-resistant Escherichia coli isolates expressing an ESBL phenotype isolated from food-producing animals and healthy humans. Journal of Antimicrobial Chemotherapy 69
Genome Sequencing: Stoeckle, B. et al., Identification of 10 polymorphic microsatellite loci in the high montane gastropod Semilimax kotulae using high-throughput sequence data. Molluscan Research 34(1)
Genome Sequencing: Fujinami et al. Genome Sequence of Deep-Sea Denitrifier Pseudomonas sp. Strain MT-1, Isolated from the Mariana Trench. Genome Announc. 2(6)
Genome Sequencing: Takeuchi et al. Complete Genome Sequence of the Biocontrol Strain Pseudomonas protegens Cab57 Discovered in Japan Reveals Strain-Specific Diversity of This Species. PLOS One 9(4)
Genome Sequencing: Bottacini et al. Comparative genomics of the Bifidobacterium breve taxon. BMC Genomics, 15:170
2013
Genome Sequencing: Zhurina et al. High-quality draft genome sequence of Bifidobacterium longum E18, isolated from a healthy adult. Genome Announc. 01084-13
Genome Sequencing: Sabat et al. Novel organization of the arginine catabolic mobile element and staphylococcal cassette chromosome mec composite island and its horizontal transfer between distinct Staphylococcus aureus genotypes. Antimicrob Agents Chemother. 57 (11)
Genome Sequencing: Naito et al. De novo assembly of the complete organelle genome sequences of azuki bean (Vigna angularis) using next-generation sequencers. Ibaraki 305-8602
Genome Sequencing: Mondy et al. Genome Sequence of the Quorum-Quenching Agrobacterium tumefaciens Strain WRT31. GenomeA 10.1270
Genome Sequencing: Chi X et al. The muraminomicin biosynthetic gene cluster and enzymatic formation of the 2-deoxyaminoribosyl appendage. Med. Chem. Commun., 4, 239-243
2012
Genome Sequencing: Stoeckle B et al. Identification of polymorphic microsatellite loci for the endangered Kagu (Rhynochetos jubatus) by high-throughput sequencing. J Ornithol 153:249-253
Genome Sequencing: Witzel K et al. Genome sequence of Enterobacter radicincitans DSM16656T, a plant growth-promoting endophyte. J. Bacteriol. vol. 194
Genome Sequencing: Zischka M et al. Complete genome sequence of the porcine isolate Enterococcus faecalis D32. J Bacteriol. vol. 194
Genome Sequencing: Karczmarczyk M et al. Complete nucleotide sequence of pVQS1 containing a quinolone resistance determinant from Salmonella enterica serovar Virchow associated with foreign travel. J Antimicrob Chemother
Genome Sequencing: Hauser H, Richter DC et al. Comparative genomic analyses of the Taylorellae. Vet Microbiol. Apr 6
Genome Sequencing: Volozhantsev NV et al. Molecular Characterization of Podoviral Bacteriophages Virulent for Clostridium perfringens and Their Comparison with Members of the Picovirinae. PLoS ONE 7(5)
Genome Sequencing: Morohoshi T et al. Complete genome sequence and characterization of the N-acylhomoserine lactone-degrading gene of the potato leaf-associated Solibacillus silvestris. J Biosci Bioeng. Jan;113(1):20-5
2011
Genome Sequencing: Zhurina et al. Complete genome sequence of Bifidobacterium bifidum S17. J Bacteriol. 193 (1)
Genome Sequencing: Amlacher, S. et al. Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile. Cell 146, July 2011, p 277-289
Genome Sequencing: Morohoshi, T. et al. Genome sequence of Microbacterium testaceum StLB037, an N-Acylhomoserine Lactone-Degrading Bacterium Isolated from Potato Leaves. Journal of bacteriology, p. 2072–2073
Genome Sequencing: Schoen, C.,Weber-Lehmann, J., Strittmatter, A., et al. Whole-genome sequence of the transformableNeisseria meningitidisserogroup A strain WUE2594. Journal of Bacteriology (JB), 27-01-2011
Genome Sequencing: Rechnitzer, H., Strittmatter, A. et al. Genomic features and insights into the biology of Mycoplasma fermentans. Microbiology, 157, 760–773
2010
Genome Sequencing: Nowrousian, M. et al. De novo Assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis. PLoS Genetics, April 2010, Volume 6, Issue 4
2009
Genome Sequencing: De Schutter K., Glinka, S., Weber-Lehmann, J. et al. Genome Sequence of the recombinant protein production hostPichia pastoris. Nature Biotechnology (2009) 27(6), 561-566
Genome Sequencing: Steuernagel B. et al. De novo 454 sequencing of barcoded BAC pools for comprehensive gene survey and genome analysis in the complex genome of barley. BMC Genomics 2009, 10:547
Bold = Eurofins employee