We provide raw data as FASTQ files for all projects. We also have advanced bioinformatics capabilities to provide optional data analysis services. The bioinformatics services available for RNA-Seq projects are as follows:
- Standard Analysis:
- Quality assessment of sequencing data
- Alignment of reads to a reference genome
- Assembly and quantification of transcripts
- Normalization of gene counts
- Identification of differentially expressed genes
- Principal component analysis (PCA)
- Significance testing
- Generation of detailed reports and visualizations
- Optional Analysis:
- Alternative splicing (AS) analysis
- Gene fusion analysis
- Variant detection and its effect on protein alteration
- Advanced Analysis:
- Gene Set Enrichment Analysis (GSEA)
Each service includes specific deliverables and has associated costs and turnaround times.